Site 3: Syracuse, NY
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| Isolate |
Adv Type |
CEID Score* |
NCBI BLAST Score† |
Date collected |
Culture site |
Age |
Gender |
Patient
hospitalized |
Transplant |
| SY0001 |
Ad1 |
96.1 |
95 |
Oct-04 |
Nasal wash |
0 |
Male |
Yes |
No |
| SY0002 |
Ad1 |
98.2 |
97 |
Oct-04 |
Nasal
wash |
0 |
Male |
No |
No |
| SY0003 |
Ad2 |
96.8 |
98 |
Nov-04 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0004 |
Ad3 |
98 |
99 |
Nov-04 |
Nasal |
36 |
Female |
Uncertain |
No |
| SY0005 |
Ad2 |
99 |
100 |
Dec-04 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0006 |
Ad1 |
99 |
99 |
Dec-04 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0007 |
Ad21 |
98 |
98 |
Dec-04 |
Nasal
wash |
4 |
Male |
Yes |
No |
| SY0008 |
Ad2 |
99 |
99 |
Dec-04 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0009 |
Ad1 |
99 |
99 |
Jan-05 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0010 |
Ad2 |
99 |
99 |
Jan-05 |
Nasal
wash |
2 |
Female |
No |
No |
| SY0011 |
Ad2 |
99 |
100 |
Jan-05 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0012 |
Ad1 |
99 |
99 |
Jan-05 |
Nasal
wash |
0 |
Female |
No |
No |
| SY0013 |
Ad1 |
99 |
98 |
Jan-05 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0014 |
Ad2 |
97 |
99 |
Jan-05 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0015 |
Ad1 |
98 |
99 |
Jan-05 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0016 |
Ad1 |
99.1 |
99 |
Jan-05 |
Nasal
wash |
0 |
Male |
No |
No |
| SY0017 |
Ad1 |
98 |
99 |
Feb-05 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0018 |
Ad1 |
99 |
99 |
Feb-05 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0019 |
Ad2 |
99.7 |
98 |
Feb-05 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0020 |
Ad2 |
97 |
99 |
Dec-04 |
Nasal
wash |
2 |
Male |
No |
No |
| SY0021 |
Ad2 |
99 |
99 |
Jan-05 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0022 |
Ad5 |
97 |
99 |
Feb-05 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0023 |
Ad5 |
99 |
99 |
Mar-05 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0024 |
Ad2 |
97 |
99 |
Mar-05 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0025 |
Ad1 |
98 |
99 |
Apr-05 |
Nasal
wash |
1 |
Male |
Yes |
No |
| SY0026 |
Ad2 |
97 |
100 |
Apr-05 |
Nasal
wash |
1 |
Female |
Yes |
No |
| SY0027 |
Ad7 |
99 |
99 |
Aug-05 |
NP
Rectal Swab |
7 |
Male |
Yes |
No |
| SY0028 |
Ad3 |
98 |
99 |
Aug-05 |
Nasopharngeal
Swab |
2 |
Female |
No |
No |
| SY0029 |
Ad2 |
99 |
99 |
Aug-05 |
Nasopharngeal
Swab |
2 |
Male |
Yes |
No |
| SY0030 |
Ad3 |
98 |
100 |
Nov-05 |
Nasopharngeal
Swab |
13 |
Male |
Yes |
No |
| SY0031 |
Ad3 |
98 |
99 |
Nov-05 |
Nasal
wash |
13 |
Male |
Yes |
No |
| SY0032 |
Ad2 |
97 |
99 |
Nov-05 |
Nasal
wash |
1 |
Female |
Yes |
No |
| SY0033 |
Ad2 |
97 |
98 |
Dec-05 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0034 |
Ad1 |
99 |
99 |
Dec-05 |
Nasal
wash |
1 |
Male |
Yes |
No |
| SY0035 |
Ad3 |
98 |
99 |
Dec-05 |
Nasal
wash |
1 |
Male |
Yes |
No |
| SY0036 |
Ad1 |
99 |
99 |
Dec-05 |
Nasal
wash |
0 |
Male |
No |
No |
| SY0037 |
Ad3 |
98 |
99 |
Jan-06 |
Nasopharngeal
Swab |
36 |
Female |
No |
Unknown |
| SY0038 |
Ad4 |
99 |
99 |
Jan-06 |
NP
Rectal Swab |
0 |
Male |
Yes |
No |
| SY0039 |
Ad3 |
99 |
99 |
Jan-06 |
Conjunctival
swab |
2 |
Female |
No |
No |
| SY0040 |
Ad3 |
99 |
99 |
Feb-06 |
Nasal
wash |
13 |
Male |
No |
No |
| SY0041 |
Ad2 |
97 |
99 |
Feb-06 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0042 |
Ad2 |
97 |
99 |
Mar-06 |
Nasal
wash |
1 |
Male |
Yes |
No |
| SY0043 |
Ad4 |
99 |
99 |
Feb-06 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0044 |
Ad4 |
99 |
99 |
Feb-06 |
Nasal
wash |
2 |
Male |
No |
No |
| SY0045 |
Ad1 |
99 |
99 |
Feb-06 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0046 |
Ad1 |
99 |
99 |
Feb-06 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0047 |
Ad1 |
99 |
100 |
Feb-06 |
Nasal
wash |
1 |
Female |
No |
No |
| SY0048 |
Ad1 |
98 |
98 |
Feb-06 |
Nasal
wash |
64 |
Male |
Yes |
No |
| SY0049 |
Ad41 |
94 |
99 |
Mar-06 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0050 |
Ad1 |
99 |
100 |
Mar-06 |
Nasal
wash |
3 |
Male |
No |
No |
| SY0051 |
Ad5 |
94 |
99 |
Apr-06 |
Nasal
wash |
1 |
Male |
Yes |
No |
| SY0052 |
Ad3 |
99 |
99 |
Apr-06 |
Nasal
wash |
6 |
Female |
No |
No |
| SY0053 |
Ad3 |
99 |
99 |
Apr-06 |
Nasal
wash |
1 |
Male |
No |
No |
| SY0054 |
Ad4 |
99 |
99 |
Apr-06 |
Nasal
wash |
15 |
Female |
No |
No |
| SY0055 |
Ad1 |
99 |
99 |
Apr-06 |
Nasal
wash |
3 |
Male |
No |
No |
| SY0056 |
Ad1 |
99 |
99 |
May-06 |
Nasal
wash |
3 |
Female |
Yes |
No |
| SY0057 |
Ad2 |
97 |
99 |
Sep-06 |
Mouth |
1 |
Male |
No |
No |
| SY0058 |
Ad3 |
99 |
99 |
May-06 |
Nasal
wash |
2 |
Male |
Yes |
No |
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| *Adv
identification by BioEdit identity score %; †Adv identification by BLAST
identity % |
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| Anything less than
90% agreement in sequence comparisons should be interpreted with caution. |
| These are research
data, and should not to be used for clinical evaluation |
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