Site 6: Manhasset, NY
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| |
Adv |
CEID |
NCBI BLAST |
Date |
Culture |
|
|
Patient |
|
| Isolate |
Type |
Score* |
Score† |
collected |
site |
Age |
Gender |
hospitalized |
Transplant |
| NY0001 |
Ad2 |
97.7 |
98 |
Oct-04 |
Nasopharyngeal |
5 |
Female |
No |
No |
| NY0002 |
Ad2 |
97 |
96 |
Oct-04 |
Nasal |
1 |
Male |
Yes |
No |
| NY0003 |
Ad4 |
99 |
96 |
Nov-04 |
Nasal |
2 |
Female |
No |
No |
| NY0004 |
Ad1 |
98 |
99 |
Dec-04 |
Nasopharynx |
3 |
Female |
No |
No |
| NY0005 |
Ad2 |
96.6 |
97 |
Dec-04 |
Nasopharynx |
2 |
Male |
Yes |
No |
| NY0006 |
Ad2 |
96 |
97 |
Dec-04 |
Nasopharyngeal |
2 |
Male |
Yes |
No |
| NY0007 |
Ad2 |
98 |
98 |
Dec-04 |
Nasal
aspirate |
3 |
Male |
No |
No |
| NY0008 |
no |
sample |
received |
|
|
|
|
|
|
| NY0009 |
Ad3 |
99 |
99 |
Jan-05 |
Nasopharyngeal |
24 |
Female |
Yes |
No |
| NY0010 |
Ad3 |
92.6 |
97 |
Jan-05 |
Nasal
Wash |
5 |
Male |
Yes |
No |
| NY0011 |
Ad3 |
98.8 |
99 |
Jan-05 |
Nasal
Wash |
5 |
Male |
Yes |
No |
| NY0012 |
Ad2 |
97 |
98 |
Jan-05 |
Nasopharyngeal |
3 |
Male |
No |
No |
| NY0013 |
Ad3 |
98.4 |
98 |
Jan-05 |
Nasopharyngeal |
4 |
Male |
No |
No |
| NY0014 |
Ad2 |
99 |
98 |
Feb-05 |
Nasopharyngeal |
1 |
Female |
No |
No |
| NY0015 |
Ad4 |
97 |
99 |
Feb-05 |
Nasopharyngeal |
1 |
Male |
Yes |
No |
| NY0016 |
Ad5 |
94 |
99 |
Feb-05 |
Nasopharyngeal |
40 |
Male |
No |
No |
| NY0017 |
Ad3 |
98 |
99 |
Feb-05 |
Nasopharyngeal |
1 |
Male |
No |
No |
| NY0018 |
Ad1 |
99 |
99 |
Feb-05 |
Nasopharyngeal |
2 |
Male |
No |
No |
| NY0019 |
Ad3 |
98 |
99 |
Mar-05 |
Nasopharyngeal |
1 |
Male |
No |
No |
| NY0020 |
Ad3 |
98 |
99 |
Feb-05 |
Nasal |
2 |
Male |
No |
No |
| NY0021 |
no |
sample |
received |
|
|
|
|
|
|
| NY0022 |
Ad1 |
99 |
99 |
Mar-05 |
Nasopharyngeal |
1 |
Male |
No |
No |
| NY0023 |
Ad2 |
97 |
99 |
Mar-05 |
Nasopharyngeal |
1 |
Male |
No |
No |
| NY0024 |
Ad
3 |
99 |
99 |
|
|
|
|
|
|
| NY0025 |
Ad
2 |
97 |
100 |
Mar-05 |
Nasopharyngeal |
1 |
Female |
No |
No |
| NY0026 |
Ad
3 |
98 |
99 |
Mar-05 |
Eye |
64 |
Male |
No |
No |
| NY0027 |
Ad1 |
98 |
99 |
Mar-05 |
Nasopharyngeal |
2 |
Male |
Yes |
No |
| NY0028 |
Ad2 |
97 |
99 |
Mar-05 |
Nasopharyngeal |
4 |
Male |
Yes |
No |
| NY0029 |
no |
sample |
received |
|
|
|
|
|
|
| NY0030 |
|
|
|
Mar-05 |
Nasopharyngeal |
1 |
Female |
No |
No |
| NY0031 |
Ad2 |
97 |
98 |
Mar-05 |
Nasopharyngeal |
1 |
Male |
No |
No |
| NY0032 |
Ad1 |
98 |
99 |
Mar-05 |
Nasopharyngeal |
8 |
Female |
Yes |
No |
| NY0033 |
Ad2 |
97 |
99 |
Apr-05 |
Nasopharyngeal |
0 |
Male |
No |
No |
| NY0034 |
Ad3 |
98 |
99 |
Apr-05 |
Nasopharyngeal |
17 |
Female |
No |
No |
| NY0035 |
Ad3 |
98 |
99 |
Apr-05 |
Nasopharyngeal |
9 |
Male |
Yes |
No |
| NY0036 |
Ad2 |
97 |
100 |
Apr-05 |
Nasopharyngeal |
2 |
Male |
No |
No |
| NY0037 |
Ad2 |
97 |
99 |
Apr-05 |
Nasopharyngeal |
2 |
Male |
No |
No |
| NY0038 |
Ad1 |
99 |
99 |
Apr-05 |
Nasopharyngeal |
1 |
Female |
No |
No |
| NY0039 |
|
|
|
Apr-05 |
Urine |
8 |
Female |
Yes |
No |
| NY0040 |
|
|
|
Apr-05 |
Pharyngeal |
8 |
Female |
Yes |
No |
| NY0041 |
Ad4 |
99 |
98 |
Apr-05 |
Nasal
Wash |
6 |
Male |
No |
No |
| NY0042 |
Ad4 |
97 |
100 |
Apr-05 |
Nasopharyngeal |
32 |
Female |
No |
No |
| NY0043 |
Ad2 |
99 |
100 |
Mar-05 |
Nasopharyngeal |
48 |
Female |
No |
No |
| NY0044 |
Ad5 |
94 |
98 |
May-05 |
Nasopharyngeal |
52 |
Male |
Yes |
No |
| NY0045 |
Ad3 |
99 |
99 |
Apr-05 |
Nasopharyngeal |
8 |
Female |
Yes |
No |
| NY0046 |
Ad5 |
93 |
98 |
Jun-05 |
Nasopharyngeal |
3 |
Female |
Yes |
No |
| NY0047 |
Ad1 |
99 |
99 |
Jun-05 |
Nasopharyngeal
swab |
1 |
Male |
Yes |
Unknown |
| NY0048 |
Ad3 |
98 |
99 |
Jun-05 |
Nasal
Wash |
60 |
Male |
Yes |
No |
| NY0049 |
Ad3 |
98 |
99 |
Jun-05 |
NP Wash |
9 |
Female |
No |
No |
| NY0050 |
Ad25 |
95 |
95 |
Jun-05 |
Anal Swab |
39 |
Male |
Yes |
No |
| NY0051 |
Ad3 |
99 |
99 |
Jul-05 |
Nasophngeal |
2 |
Female |
No |
No |
| NY0052 |
Ad1 |
99 |
100 |
Jul-05 |
Nasal |
0 |
Male |
No |
No |
| NY0053 |
Ad2 |
97 |
97 |
Jul-05 |
Stool |
0 |
Male |
Yes |
Bone
marrow |
| NY0054 |
Ad2 |
97 |
97 |
Jul-05 |
Stool |
0 |
Male |
Yes |
Bone
marrow |
| NY0055 |
Ad2 |
97 |
99 |
Jul-05 |
Urine |
0 |
Male |
Yes |
Bone
marrow |
| NY0056 |
Ad2 |
99 |
100 |
Jul-05 |
Nasal
aspirate |
2 |
Male |
Yes |
No |
| NY0057 |
Ad4 |
100 |
99 |
Aug-05 |
Nasal |
7 |
Male |
No |
No |
| NY0058 |
Ad4 |
99 |
99 |
Aug-05 |
Pharyngeal |
7 |
Male |
No |
No |
| NY0059 |
Ad3 |
91 |
92 |
Aug-05 |
Rectal |
5 |
Female |
No |
No |
| NY0060 |
Ad3 |
98 |
99 |
Aug-05 |
Nasopharyngeal
swab |
5 |
Female |
No |
No |
| NY0061 |
Ad1 |
99 |
99 |
Aug-05 |
NP
Wash |
5 |
Male |
No |
No |
| NY0062 |
Ad2 |
96 |
99 |
Sep-05 |
Oral |
34 |
Male |
Yes |
No |
| NY0063 |
Ad3 |
98 |
99 |
|
|
|
|
|
|
| NY0064 |
Ad21 |
98 |
98 |
Nov-05 |
Nasal |
22 |
Female |
Yes |
No |
| NY0065 |
Ad4 |
96 |
95 |
Nov-05 |
Nasal |
3 |
Male |
No |
No |
| NY0066 |
Ad3 |
98 |
99 |
Nov-05 |
Nasal
aspirate |
5 |
Female |
No |
No |
| NY0067 |
Ad4 |
100 |
99 |
Nov-05 |
Nasal |
4 |
Female |
No |
No |
| NY0068 |
Ad1 |
99 |
99 |
Nov-05 |
Rectal |
2 |
Male |
No |
No |
| NY0069 |
Ad3 |
98 |
100 |
Nov-05 |
Nasal |
4 |
Male |
No |
No |
| NY0070 |
Ad3 |
98 |
100 |
Dec-05 |
Nasopharyngeal |
52 |
Female |
No |
No |
| NY0071 |
Ad3 |
99 |
99 |
Dec-05 |
Nasopharyngeal |
46 |
Male |
No |
No |
| NY0072 |
Ad2 |
97 |
99 |
Dec-05 |
Nasopharyngeal |
1 |
Female |
No |
No |
| NY0073 |
Ad3 |
99 |
99 |
Dec-05 |
Nasopharyngeal |
7 |
Male |
No |
No |
| NY0074 |
Ad3 |
98 |
99 |
Dec-05 |
Nasal
Wash |
7 |
Female |
No |
No |
| NY0075 |
Ad1 |
99 |
100 |
Dec-05 |
Nasal |
1 |
Female |
No |
No |
| NY0076 |
Ad3 |
98 |
100 |
Dec-05 |
Nasal |
42 |
Male |
No |
No |
| NY0077 |
Ad2 |
99 |
99 |
Dec-05 |
Nasopharyngeal
wash |
2 |
Male |
Yes |
No |
| NY0078 |
Ad3 |
99 |
100 |
Dec-05 |
Nasopharyngeal
swab |
4 |
Male |
No |
No |
| NY0079 |
Ad2 |
97 |
100 |
Dec-05 |
Nasopharyngeal
wash |
2 |
Male |
No |
No |
| NY0080 |
Ad3 |
99 |
99 |
Dec-05 |
Nasopharyngeal
swab |
3 |
Male |
No |
No |
| NY0081 |
Ad1 |
99 |
99 |
|
|
|
|
|
|
| NY0082 |
Ad3 |
99 |
99 |
Dec-05 |
Nasal
wash |
6 |
Male |
Yes |
No |
| NY0083 |
Ad2 |
97 |
99 |
Jan-06 |
NP
aspirate |
1 |
Male |
Yes |
No |
| NY0084 |
Ad3 |
99 |
99 |
Jan-06 |
Nasopharyngeal
swab |
37 |
Male |
No |
No |
| NY0085 |
Ad3 |
99 |
99 |
Jan-06 |
Nasopharyngeal
swab |
30 |
Female |
No |
No |
| NY0086 |
Ad3 |
99 |
99 |
Jan-06 |
Nasopharyngeal
swab |
5 |
Female |
No |
No |
| NY0087 |
Ad3 |
99 |
99 |
Jan-06 |
Nasal
wash |
13 |
Male |
Yes |
No |
| NY0088 |
Ad4 |
99 |
99 |
Jan-06 |
Nasal |
18 |
Female |
No |
No |
| NY0089 |
Ad4 |
100 |
99 |
Jan-06 |
Nasal
wash |
3 |
Female |
No |
No |
| NY0090 |
Ad1 |
99 |
99 |
Jan-06 |
Nasal
wash |
2 |
Male |
No |
No |
| NY0091 |
Ad7 |
99 |
99 |
Jan-06 |
Nasopharyngeal
swab |
48 |
Male |
No |
No |
| NY0092 |
Ad3 |
99 |
99 |
Jan-06 |
Nasal
wash |
6 |
Female |
No |
No |
| NY0093 |
Ad2 |
97 |
100 |
Jan-06 |
Nasopharyngeal |
1 |
Male |
Yes |
No |
| NY0094 |
Ad1 |
99 |
100 |
Jan-06 |
Nasal
wash |
1 |
Female |
Yes |
No |
| NY0095 |
Ad3 |
99 |
99 |
Jan-06 |
Nasal
wash |
2 |
Male |
Yes |
No |
| NY0096 |
Ad3 |
99 |
99 |
Jan-06 |
Conjuctival
swab |
57 |
Female |
No |
No |
| NY0097 |
Ad3 |
99 |
99 |
Jan-06 |
Nasal
wash |
2 |
Male |
Yes |
No |
| NY0098 |
Ad3 |
99 |
99 |
Feb-06 |
Nasal |
3 |
Female |
No |
No |
| NY0099 |
Ad1 |
99 |
100 |
Feb-06 |
CSF |
48 |
Male |
Yes |
No |
| NY0100 |
Ad3 |
99 |
100 |
Feb-06 |
Nasopharyngeal
swab |
7 |
Female |
No |
No |
| NY0101 |
Ad3 |
99 |
99 |
Feb-06 |
Nasal
wash |
5 |
Male |
No |
No |
| NY0102 |
Ad2 |
97 |
100 |
Feb-06 |
Nasopharyngeal
swab |
7 |
Male |
No |
No |
| NY0103 |
Ad3 |
99 |
99 |
Feb-06 |
Nasopharyngeal
wash |
1 |
Female |
No |
No |
| NY0104 |
Ad3 |
99 |
99 |
Feb-06 |
Nasal
wash |
5 |
Female |
No |
No |
| NY0105 |
Ad3 |
99 |
99 |
Feb-06 |
Nasal
wash |
2 |
Female |
No |
No |
| NY0106 |
Ad2 |
97 |
99 |
Mar-06 |
Nasal
wash |
2 |
Male |
No |
No |
| NY0107 |
Ad14 |
99 |
99 |
Mar-06 |
Nasal
wash |
17 |
Male |
No |
No |
| NY0108 |
Ad3 |
99 |
99 |
Mar-06 |
Nasopharyngeal
swab |
38 |
Female |
No |
No |
| NY0109 |
Ad3 |
99 |
99 |
Mar-06 |
Nasopharyngeal
swab |
2 |
Male |
No |
No |
| NY0110 |
Ad3 |
99 |
99 |
Mar-06 |
Nasopharyngeal
swab |
4 |
Female |
No |
No |
| NY0111 |
Ad3 |
98 |
99 |
Mar-06 |
Nasal
wash |
9 |
Male |
No |
No |
| NY0112 |
Ad3 |
99 |
99 |
Mar-06 |
Nasopharyngeal
swab |
4 |
Male |
Yes |
No |
| NY0113 |
Ad3 |
99 |
99 |
Mar-06 |
Nasopharyngeal
swab |
3 |
Female |
No |
No |
| NY0114 |
Ad1 |
98 |
99 |
Mar-06 |
Nasal
wash |
2 |
Female |
No |
No |
| NY0115 |
Ad3 |
99 |
99 |
Mar-06 |
Nasopharyngeal
swab |
2 |
Female |
No |
No |
| NY0116 |
Ad3 |
99 |
99 |
Mar-06 |
Nasal
wash |
4 |
Female |
No |
No |
| NY0117 |
Ad3 |
99 |
100 |
Mar-06 |
Nasal
wash |
7 |
Female |
No |
|
| NY0118 |
Ad3 |
99 |
99 |
Mar-06 |
Nasal
wash |
3 |
Male |
No |
No |
| NY0119 |
Ad2 |
97 |
100 |
Mar-06 |
Nasopharyngeal |
2 |
Male |
Yes |
No |
| NY0120 |
Ad3 |
99 |
99 |
Mar-06 |
Nasopharyngeal |
5 |
Male |
No |
No |
| NY0121 |
Ad4 |
99 |
99 |
Mar-06 |
Nasal
wash |
16 |
Male |
No |
No |
| NY0122 |
Ad2 |
97 |
100 |
Apr-06 |
Nasopharyngeal
swab |
34 |
Male |
No |
No |
| NY0123 |
Ad2 |
97 |
100 |
Apr-06 |
Nasopharyngeal
swab |
1 |
Female |
No |
No |
| NY0124 |
Ad3 |
99 |
99 |
Apr-06 |
Nasal
wash |
15 |
Male |
No |
No |
| NY0125 |
Ad1 |
99 |
99 |
Apr-06 |
Stool |
10 |
Female |
Yes |
Heart |
| NY0126 |
Ad2 |
97 |
99 |
Apr-06 |
Nasal
wash |
5 |
Male |
No |
No |
| NY0127 |
Ad1 |
100 |
99 |
Apr-06 |
Nasal
wash |
2 |
| |