Creates a single plot of the Geweke convergence diagnostics within different line segments for a parameter in an MCMC sequence.
boa.plot.geweke(lname, pname, bins = boa.par("geweke.bins"), p.first = boa.par("geweke.first"), p.last = boa.par("geweke.last"), alpha = boa.par("alpha"), annotate = boa.par("legend"))
||Character string giving the name of the desired MCMC sequence in the working session list of sequences.|
||Character string giving the name of the parameter to be plotted.|
||Number of line segments within the MCMC sequence at which to plot the Geweke convergence diagnostics. The ith line segment contains the last ((bins - i + 1) / bins)*100 bins. This may lead to segments in which there are too few iterations to compute the convergence diagnostics. Such segments, if they exist, are automatically omitted from the calculations.|
||Proportion of iterations to include in the first window.|
||Proportion of iterations to include in the last window.|
||Alpha level for the rejection region lines drawn on the graph.|
||Logical value indicating that a legend be included in the plot.|
A logical value indicating that the plot was successfully created.
Brian J. Smith, Nicky Best, Kate Cowles